| Title | Authors | Publication | Year |
|---|
| Cell type-targeted mitochondrial transplantation rescues cell degeneration | Temurkhan Ayupov, Verónica Moreno-Juan, Serena Curtoni, Alex Fratzl, Upnishad Sharma, Susana Posada-Céspedes, Ramona Ratiu, Rei Morikawa, Alexandra Graff Meyer, Margherita Pezzoli, Glenn Bantug, Morgan Chevalier, Yanyan Hou, Sarah A. Nadeau, Álvaro Herrero-Navarro, Vikram Ayinampudi, Elizabeth Kastanaki, Natasha Whitehead, Rebecca A. Siwicki, Mariana M. Ribeiro, Ji Hoon Han, Annalisa Bucci, Christoph Hess, Simone Picelli, Magdalena Renner, Daniel J. Müller, Cameron S. Cowan, Simon Hansen, Botond Roska | Nature | 2026 |
| High-efficiency base editing in the retina in primates and human tissues | Alissa Muller, Jack Sullivan, Wibke Schwarzer, Mantian Wang, Cindy Park-Windhol, Pascal W Hasler, Lucas Janeschitz-Kriegl, Mert Duman, Beryll Klingler, Jane Matsell, Simon Manuel Hostettler, Patricia Galliker, Yanyan Hou, Pierre Balmer, Tamás Virág, Luis Alberto Barrera, Lauren Young, Quan Xu, Dániel Péter Magda, Ferenc Kilin, Arogya Khadka, Pierre-Henri Moreau, Lyne Fellmann, Thierry Azoulay, Mathieu Quinodoz, Duygu Karademir, Juna Leppert, Alex Fratzl, Georg Kosche, Ruchi Sharma, Jair Montford, Marco Cattaneo, Mikaël Croyal, Therese Cronin, Simone Picelli, Alice Grison, Cameron S Cowan, Ákos Kusnyerik, Philipp Anders, Magdalena Renner, Zoltán Zsolt Nagy, Arnold Szabó, Kapil Bharti, Carlo Rivolta, Hendrik P N Scholl, David Bryson, Giuseppe Ciaramella, Botond Roska, Bence György | Nature Medicine | 2025 |
| Multimodal spatiotemporal phenotyping of human retinal organoid development | Philipp Wahle, Giovanna Brancati, Christoph Harmel, Zhisong He, Gabriele Gut, Jacobo Sarabia Del Castillo, Aline Xavier da Silveira Dos Santos, Qianhui Yu, Pascal Noser, Jonas Simon Fleck, Bruno Gjeta, Dinko Pavlinić, Simone Picelli, Max Hess, Gregor W Schmidt, Tom T A Lummen, Yanyan Hou, Patricia Galliker, David Goldblum, Marton Balogh, Cameron S Cowan, Hendrik P N Scholl, Botond Roska, Magdalena Renner, Lucas Pelkmans, Barbara Treutlein, J Gray Camp | Nature biotechnology | 2023 |
| Fast and highly sensitive full-length single-cell RNA sequencing using FLASH-seq | Vincent Hahaut, Dinko Pavlinic, Walter Carbone, Sven Schuierer, Pierre Balmer, Mathieu Quinodoz, Magdalena Renner, Guglielmo Roma, Cameron S Cowan, Simone Picelli | Nature biotechnology | 2022 |
| Adenoviral-based vaccine promotes neoantigen-specific CD8+ T cell stemness and tumor rejection | Anna Morena D'Alise, Nadia Brasu, Carlo De Intinis, Guido Leoni, Valentina Russo, Francesca Langone, Denis Baev, Elisa Micarelli, Luca Petiti, Simone Picelli, Marwan Fakih, Dung T Le, Michael J Overman, Anthony F Shields, Katrina S Pedersen, Manish A Shah, Sarbajit Mukherjee, Thea Faivre, Patricia Delaite, Elisa Scarselli, Luigia Pace | Science translational medicine | 2022 |
| Full-Length Single-Cell RNA-Sequencing with FLASH-seq | Vincent Hahaut, Simone Picelli | Methods in molecular biology (Clifton, N.J.) | 2022 |
| Pyramidal neurons form active, transient, multilayered circuits perturbed by autism-associated mutations at the inception of neocortex | Martin Munz, Arjun Bharioke, Georg Kosche, Verónica Moreno-Juan, Alexandra Brignall, Tiago M Rodrigues, Alexandra Graff-Meyer, Talia Ulmer, Stephanie Haeuselmann, Dinko Pavlinic, Nicole Ledergerber, Brigitte Gross-Scherf, Balázs Rózsa, Jacek Krol, Simone Picelli, Cameron S Cowan, Botond Roska | Cell | 2023 |
| Tutorial: guidelines for the experimental design of single-cell RNA sequencing studies | Atefeh Lafzi, Catia Moutinho, Simone Picelli, Holger Heyn | Nature protocols | 2018 |
| Cell Types of the Human Retina and Its Organoids at Single-Cell Resolution | Cameron S Cowan, Magdalena Renner, Martina De Gennaro, Brigitte Gross-Scherf, David Goldblum, Yanyan Hou, Martin Munz, Tiago M Rodrigues, Jacek Krol, Tamas Szikra, Rachel Cuttat, Annick Waldt, Panagiotis Papasaikas, Roland Diggelmann, Claudia P Patino-Alvarez, Patricia Galliker, Stefan E Spirig, Dinko Pavlinic, Nadine Gerber-Hollbach, Sven Schuierer, Aldin Srdanovic, Marton Balogh, Riccardo Panero, Akos Kusnyerik, Arnold Szabo, Michael B Stadler, Selim Orgül, Simone Picelli, Pascal W Hasler, Andreas Hierlemann, Hendrik P N Scholl, Guglielmo Roma, Florian Nigsch, Botond Roska | Cell | 2020 |
| Cell type-focused compound screen in human organoids reveals CK1 inhibition protects cone photoreceptors from death | Stefan E. Spirig, Álvaro Herrero-Navarro, Larissa Utz, Valeria J. Arteaga-Moreta, Zoltan Raics, Susana Posada-Céspedes, Stephanie Chreng, Olaf Galuba, Inga Galuba, Isabelle Claerr, Steffen Renner, Miklos Boldogkoi, Verónica Moreno-Juan, P. Timo Kleindienst, Adrienn Volak, Jannick Imbach, Svitlana Malysheva, Rebecca A. Siwicki, Vincent Hahaut, Yanyan Hou, Tiago M. Rodrigues, Simone Picelli, Marco Cattaneo, Josephine Jüttner, Cameron S. Cowan, Myriam Duckely, Daniel K. Baeschlin, Magdalena Renner, Vincent Unterreiner, Botond Roska | Neuron | 2026 |
| Retinal ganglion cell survival and functional maturation in transiently vascularized human retinal organoids | Kritika Sharma, Rouhollah Habibey, Mariana M Ribeiro, Bohao Cui, Rebecca A Siwicki, Johannes Striebel, Julia S Pawlick, Jasmin Zorn, Larissa Utz, Magdalena Renner, Simone Picelli, Frank G Holz, Carmen Ruiz de Almodóvar, Cameron S Cowan, Volker Busskamp | Cell Stem Cell | 2026 |